Skip to contents

Simple SBM

Set of classes and functions for manipulating simple stochastic block models

SimpleSBM
R6 class for Simple SBM
SimpleSBM_fit
R6 Class definition of a Simple SBM fit
sampleSimpleSBM()
Sampling of Simple SBMs
estimateSimpleSBM()
Estimation of Simple SBMs

Bipartite SBM

Set of classes and functions for manipulating bipartite stochastic block models

BipartiteSBM
R6 class for Bipartite SBM
BipartiteSBM_fit
R6 Class definition of an Bipartite SBM fit
sampleBipartiteSBM()
Sampling of Bipartite SBMs
estimateBipartiteSBM()
Estimation of Bipartite SBMs

Multipartite SBM

Set of classes and functions for manipulating multipartite stochastic block models

MultipartiteSBM
R6 Class definition of a Multipartite SBM
MultipartiteSBM_fit
R6 Class definition of a Multipartite SBM fit
sampleMultipartiteSBM()
Sampling of Multipartite SBMs
estimateMultipartiteSBM()
Estimation for multipartite SBM

Multiplex (aka multilayer) SBM

Set of classes and functions for manipulating multiplex stochastic block models

MultiplexSBM_fit
R6 Class definition of a Multiplex SBM fit
sampleMultiplexSBM()
Sampling of Multiplex SBMs
estimateMultiplexSBM()
Estimation for Multiplex SBM
plotMyMultiplexMatrix()
Plot the matrices corresponding to a Multiplex Network

Methods common to all SBM

Set of classes and functions for manipulating stochastic block models

is_SBM()
Auxiliary function to check the given class of an object
plot(<SBM>)
SBM Plot
predict(<SBM>)
Model Predictions
coef(<SBM>)
Extract model coefficients
fitted(<SBM>)
Extract model fitted values
defineSBM()
Define a network
plotMyMatrix()
Plot an adjacency or incidence Matrix
plotMyGraphon()
Plot the graphon of a Stochastic Block Model
plotMyMultipartiteMatrix()
Plot the matrices corresponding to a Multipartite Network

Data sets

Sets of data available

fungusTreeNetwork
fungus-tree interaction network
multipartiteEcologicalNetwork
Ecological multipartite interaction network
war
War data set

Others

Miscellaneous

plotAlluvial()
Plot an alluvial plot between clusterings

Virtual methods

Comprehensive list of remaining classes and methods used internally

SBM
R6 virtual class for SBM representation (mother class of SimpleSBM, BipartiteSBM, MultipartiteSBM)